灰黄青霉D-756实时荧光定量PCR体系的建立及验证

    Establishment and Validation of the Real-time Fluorescence Quantitative PCR System for Penicillium Griseofulvum D-756

    • 摘要: 灰黄青霉D-756是1株灰黄霉素高产突变菌株,从转录水平揭示其灰黄霉素合成关键基因的表达情况,有助于了解其基因功能进而对菌株进行定向遗传改造。利用Primer3和Primer-BLAST设计引物,经qPCR验证,引物的扩增产物单一且扩增效率在90%~110%范围内,通过geNorm软件对TUBB、HISH3、RPS24和28S rRNA 4个候选内参基因的表达稳定性进行评价,选择评价结果中较为稳定的候选基因TUBB和RPS24作为内参基因,构建了一个适用于灰黄青霉D-756的qPCR体系。并用该体系检测灰黄青霉D-756中灰黄霉素合成关键基因gsfA在不同培养时间下的相对表达情况,为下一步研究灰黄霉素合成基因簇中各基因功能提供一个有力的工具。

       

      Abstract: Penicillium griseofulvum D-756 was a mutant strain with high yield of griseofulvin. Revealing the expression of key genes in the biosynthesis of griseofulvin at the transcriptional level would be helpful to understand its gene function and to carry out the directional genetic modification of the strain. The primers were designed by using Primer3 and Primer BLAST. After the qPCR verification, the amplified products of the primers were single and the amplification efficiency was in the range of 90%-110%. Then, the expression stability of the four candidate reference genes TUBB, HISH3, RPS24 and 28S rRNA was evaluated by using the geNorm software. The candidate genes TUBB and RPS24, which were relatively stable in the evaluation results, were selected as the reference genes to construct a qPCR system suitable for Penicillium griseofulvum D-756. Last, this system was used to detect the relative expression of gsfA, the key gene for the biosynthesis of griseofulvin in Penicillium griseofulvum D-756, at different culture times, thus to provide a powerful tool for the further study of each gene function in the biosynthetic gene cluster of griseofulvin.

       

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