杨理程,吴锐琼,李培健,等. 基于Sanger测序方法检测赛鸽竞翔相关基因的单核苷酸多态性 [J]. 福建农业科技,2024,55(7):01−09. DOI: 10.13651/j.cnki.fjnykj.2024.07.001
    引用本文: 杨理程,吴锐琼,李培健,等. 基于Sanger测序方法检测赛鸽竞翔相关基因的单核苷酸多态性 [J]. 福建农业科技,2024,55(7):01−09. DOI: 10.13651/j.cnki.fjnykj.2024.07.001
    YANG Li-cheng, WU Rui-qiong, LI Pei-jian, WANG Bing-mei, HUANG Zhen. Detection of single nucleotide polymorphisms in genes associated with homing behavior in racing pigeons using the Sanger sequencing method[J]. Fujian Agricultural Science and Technology. DOI: 10.13651/j.cnki.fjnykj.2024.07.001
    Citation: YANG Li-cheng, WU Rui-qiong, LI Pei-jian, WANG Bing-mei, HUANG Zhen. Detection of single nucleotide polymorphisms in genes associated with homing behavior in racing pigeons using the Sanger sequencing method[J]. Fujian Agricultural Science and Technology. DOI: 10.13651/j.cnki.fjnykj.2024.07.001

    基于Sanger测序方法检测赛鸽竞翔相关基因的单核苷酸多态性

    Detection of single nucleotide polymorphisms in genes associated with homing behavior in racing pigeons using the Sanger sequencing method

    • 摘要: 大量研究发现赛鸽中LDHAF-KERDRD4MSTNCRY1这5个基因存在单核苷酸多态性,并与归巢能力相关,成为分子辅助育种的潜在SNP标记。当前的检测方法仍以传统的RFLP为主,尚未报道Sanger测序的应用。通过建立一种基于Sanger测序技术的检测方法,以识别这5个基因中的多态性位点。结果表明:针对赛鸽的LDHAF-KERDRD4MSTNCRY1基因设计了特异性引物,用于扩增单核苷酸多态性位点,所得PCR产物条带单一,显示具有良好的特异性。进一步,利用这些引物对60羽赛鸽的羽毛DNA样品进行扩增和Sanger测序,能成功获得各个基因位点的多态性分型结果。最后,统计了各种基因分型在这60羽赛鸽中的分布频率,发现相关的罕见基因型频率均低于5%,与国外赛鸽群体的频率相一致。研究显示所建立的赛鸽竞翔相关基因SNP分型Sanger测序分析方法,对于选育优良基因型的赛鸽具有重要的应用价值。

       

      Abstract: Numerous studies have found that genes such as LDHA, F-KER, DRD4, MSTN, and CRY1 in racing pigeons exhibit single nucleotide polymorphisms(SNPs)that are associated with homing ability, making them potential SNP markers for molecular-assisted breeding. Current detection methods are still predominantly based on traditional RFLP, and the application of Sanger sequencing has not been reported yet. This study aims to establish a detection method based on Sanger sequencing technology to identify polymorphic sites in these five genes. The results demonstrate that specific primers for the SNPs of the LDHA, F-KER, DRD4, MSTN, and CRY1 genes in racing pigeons were designed, and the amplified PCR products yielded single, specific bands. Furthermore, using these primers, amplification and Sanger sequencing were performed on feather DNA samples from 60 racing pigeons, successfully obtaining polymorphic typing results for each gene locus. Finally, the distribution frequency of various genotypes among these 60 racing pigeons was statistically analyzed, showing that the frequencies of the relevant rare genotypes were all below 5%, consistent with the frequencies reported in foreign racing pigeon populations. The Sanger sequencing analysis method established in this study for SNP typing of racing pigeon performance-related genes holds significant practical value for breeding superior genotypes of racing pigeons.

       

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