不同致病力青枯雷尔氏菌胁迫对番茄根际细菌群落组成的影响

    Effects of Ralstonia solanacearum strains with different pathogenicity on the bacterial community composition of tomato rhizosphere

    • 摘要: 植物青枯病是由青枯雷尔氏菌Ralstonia solanacearum引起的一种毁灭性土传病害,利用青枯雷尔氏菌无致病力菌株进行生物防治是预防和控制青枯病的关键策略之一。以番茄Solanum lycopersicum与青枯雷尔氏菌R. solanacearum互作系统为研究对象,设立了两个接菌处理组,分别接种无致病力菌株FJAT-1458与强致病力菌株FJAT-91,同时以未接菌的番茄植株作为空白对照组(CK),分析不同致病力青枯雷尔氏菌胁迫对番茄根际细菌群落组成的影响。采用Illumina MiSeq高通量测序技术对3组共15份根际土壤样本进行检测,共获得1 301 685条高质量序列,注释为6 989个操作分类单元(OTU),涵盖38个门、98个纲、271个目、421个科和770个属。其中,变形菌门Proteobacteria、疣微菌门Verrucomicrobiota、拟杆菌门Bacteroidota、粘球菌门Myxococcota、酸杆菌门Acidobacteriota和浮霉菌门Planctomycetota等是番茄根际土壤细菌优势菌门。层次聚类Hierarchical clustering分析表明,强致病力菌株FJAT-91胁迫显著改变了番茄根际细菌群落的组成和结构,而无致病力菌株FJAT-1458处理组与CK的细菌群落构成更为相似。进一步分析根际细菌丰度和多样性指数发现,在强致病力菌株FJAT-91的胁迫下,番茄根际细菌群落的Shannon指数与CK相比极显著的下降(P<0.01),表明根际细菌群落的多样性出现退化;而在无致病力菌株FJAT-1458的胁迫下,Chao1指数和Shannon指数与CK相比略有提高(P>0.05),表明根际细菌群落稳定性和多样性得到了一定程度增强;在不同致病力青枯菌胁迫下,根际细菌多样性差异显著,无致病力菌株FJAT-1458处理组的Chao1指数显著高于强致病力菌株FJAT-91处理组(P<0.05),Shannon指数则极显著高于FJAT-91处理组(P<0.01)。通过线性判别分析(LEfSe)分析,进一步明确了根际细菌群落中的差异指示物种。这些结果初步揭示了青枯雷尔氏菌强致病力菌株与无致病力菌株对番茄根际土壤中细菌群落的多样性和分布特征的影响。

       

      Abstract: Bacterial wilt, a devastating soilborne disease caused by Ralstonia solanacearum, is a major threat to plant health. A key strategy for managing this disease is the use of avirulent strains of R. solanacearum for biological control. This study focused on the interaction system between Solanum lycopersicum and Ralstonia solanacearum.By establishing two inoculation treatments(plants inoculated with the avirulent strain FJAT-1458 and the virulent strain FJAT-91, respectively)and setting up a mock-inoculated control group(CK), we aimed to investigate the effects of Ralstonia solanacearum strains with different pathogenicity on the bacterial community composition of tomato rhizosphere. Using Illumina MiSeq high-throughput sequencing, we analyzed 15 rhizosphere soil samples across three groups. A total of 1,301,685 high-quality sequences were obtained and annotated into 6,989 operational taxonomic units(OTUs), covering 38 phyla, 98 classes, 271 orders, 421 families, and 770 genera. The results showed that Proteobacteria, Verrucomicrobiota, Bacteroidota, Myxococcota, Acidobacteriota, and Planctomycetota were the dominant bacterial phyla in the rhizosphere soil of tomato plants. Hierarchical clustering analysis revealed that FJAT-91 stress treatment significantly altered the composition and structure of the tomato rhizosphere bacterial community, while the bacterial community composition of the FJAT-1458 treatment group was more similar to that of the control group. Further analysis of the abundance and diversity indices of rhizobacteria showed that under FJAT-91 inoculation, the Shannon diversity index of the rhizobacterial community in tomato plants was highly significantly reduced compared to the CK group(P<0.01), indicating a decrease in the diversity of the rhizobacterial community. In contrast, under FJAT-1458 inoculation, both the Chao and Shannon indices were higher than in the CK group(P>0.05), indicating an improvement in the stability and diversity of the rhizobacterial community. In addition, under the stress of different pathogenic strains of R. solanacearum, there were significant differences in rhizobacterial diversity, with the Chao1 index of the FJAT-1458 group being significantly higher than that of the FJAT-91 group(P<0.05)and the Shannon index being highly significantly higher than that of the FJAT-91 group(P<0.01). Using linear discriminant analysis (LEfSe), we further identified the differential biomarker species within the rhizobacterial communities. These results provide initial insights into the effects of virulent and avirulent strains of R. solanacearum on the diversity and distribution of bacterial communities in the soil rhizosphere of tomato plants. This study provides valuable data for elucidating the mechanisms of biological control by avirulent strains against bacterial wilt and for guiding the prevention and control of bacterial wilt.

       

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